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AutoDiffSource

Julia automatic differentiation with source code transformation

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AutoDiffSource

Automatic differentiation with source code transformation in Julia (reverse mode). Functions can be nested and have multiple scalar or tensor return values. Works with ArrayFire GPU arrays.

AutoDiffSource AutoDiffSource Build Status codecov

Install (requires Julia v0.5):

Pkg.add("AutoDiffSource") 
# Pkg.checkout("AutoDiffSource") # To stay on top of development releases
using AutoDiffSource

Differentiate a function with macro:

# you can type δ with \delta<TAB> 
@δ f(x, y) = (x + 2y) * y^2

That will generate both a regular function f and a special δf function:

z, ∇f = δf(x, y)
∂x, ∂y = ∇f()

Functions can be nested and corresponding δ functions are found by convention, multiple return values are supported too:

@δ function f2(x, y)
   q = f(x * y, y) * x
   q + y, q - x
end

To calculate the value and get a closure function for the gradient:

z, t, ∇f2 = δf2(x, y)

To calculate the gradient later, once partial derivates are known, just call the closure as a regular function:

∂x, ∂y = ∇f2(∂z, ∂t)

You can define a function with your own gradient calculations:

div(x, y) = x / y
δdiv(x, y) = (x/y, z -> (z/y, -z*x/y^2))

Can be used as a building block for other functions:

@δ f3(x, y) = div(x, y) + y

Simple array indexing is supported:

rosenbrock(x, y) = sum(100*(y-x.^2).^2 + (1-x).^2)

@δ rosenbrock(x) = rosenbrock(x[1:length(x)-1], x[2:length(x)])

# verify correctness
@assert checkdiff(rosenbrock, δrosenbrock, randn(3))

If you have function arguments that you don't need to differentiate:

@δ f4(x, c) = sum(c .* x)

# just call the version with the "_constN" signature, in this case argument #2 is constant
z, ∇f4 = δf4_const2(x, c)

# the derivative of c will not be calculated
∂x = ∇f4()

Example from training an autoencoder NN:

sigmoid(x) = 1 / (1 + exp(-x))

function autoencoder(We1, We2, Wd, b1, b2, input)
    firstLayer = sigmoid.(We1 * input + b1)
    encodedInput = sigmoid.(We2 * firstLayer + b2)
    reconstructedInput = sigmoid.(Wd * encodedInput)
    return reconstructedInput
end

@δ function autoencoderError(We1, We2, Wd, b1, b2, input)
    reconstructedInput = autoencoder(We1, We2, Wd, b1, b2, input)
    return sum((input - reconstructedInput).^2)
end

@assert checkdiff(autoencoderError, δautoencoderError, 
                  randn(3,3), randn(3,3), rand(3,3), randn(3), randn(3), randn(3))

value, ∇autoencoderError = δautoencoderError_const6(We1, We2, Wd, b1, b2, input)
∂We1, ∂We2, ∂Wd, ∂b1, ∂b2 = ∇autoencoderError()

Comparison to similar efforts

ReverseDiffSource is pretty close and has more features. This one is faster, easier to use, and supports functions with multiple return values. Since forward and backward passes are separate it can differentiate nested functions or be plugged in to your own gradient learning code.

First Commit

11/02/2016

Last Touched

28 days ago

Commits

261 commits

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