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RLEVectors

Run Length Encoded vectors for julia, inspired by BioConductor.

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RLEVectors

RLEVectors is an alternate implementation of the Rle type from Bioconductor's IRanges package by H. Pages, P. Aboyoun and M. Lawrence. RLEVectors represent a vector with repeated values as the ordered set of values and repeat extents. In the field of genomics, data of various types are measured across the ~3 billion letters in the human genome can often be represented in a few thousand runs. It is useful to know the bounds of genome regions covered by these runs, the values associated with these runs, and to be able to perform various mathematical operations on these values.

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First Commit

05/28/2015

Last Touched

4 days ago

Commits

240 commits

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