dummy-link

1

Bio

Bioinformatics and Computational Biology Infrastructure for Julia

2

IntervalTrees

A data structure for efficient manipulation of sets of intervals

3

BioSymbols

Nucleic and amino acid primitive types

4

BioAlignments

Sequence alignment tools

5

BioStructures

A julia package to read, write and manipulate macromolecular structures (particularly proteins)

6

MbedTLS

Wrapper around mbedtls

7

BioSequences

Biological sequences for the julia language

8

SubstitutionModels

Biological Sequence Substitution Models for Julia

9

BioEnergeticFoodWebs

A unified interface for simulations of the Bio-Energetic model on food webs

10

GeneticVariation

Datastructures and algorithms for working with genetic variation

11

BufferedStreams

Fast composable IO streams

12

BBI

13

BioServices

Julia interface to APIs for various bio-related web services

14

BioTools

Interfaces to common external biological tools from julia scripts and programs

15

TOML

A TOML parser for Julia.

16

BioCore

Core types and interfaces for BioJulia packages

17

GenomicFeatures

Tools for genomic features in Julia.

18

WebIO

a bridge between Julia and web technologies

19

BioMedQuery

Julia utilities to interact with BioMedical Databases and APIs

20

DiffEqBiological

DiffEq related functionality for defining biological models

21

GslibIO

Utilities to read/write extended GSLIB files in Julia

22

Microbiome

For analysis of microbiome and microbial community data

23

Bio3DView

A julia package to view macromolecular structures in the REPL or in a Jupyter notebook/JupyterLab

25

BiobakeryUtils

A companion package for Microbiome.jl for working with the Biobakery family of computational tools

26

ForestBiometrics

A library for various forest mensuration and biometrics functions in Julia

27

BiomolecularStructures

The BiomolecularStructures package provides several Bioinformatics-related modules for Julia.

28

BioSeq

Julia's package for working on Bioinformatics with DNA, RNA and Protein Sequences

29

SolveBio

SolveBio Julia bindings